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Sharing Research Ideas and Interests for Blue Waters Computing Projects

This site provides an opportunity for scientists to share ideas and form collaborations for Blue Waters projects within the NIGMS mission. Visit the online form to submit or change information.

Blue Waters Link to external Web site is a petascale computing system under construction by the National Center for Supercomputing Applications (NCSA) Link to external Web site at the University of Illinois. The National Science Foundation is soliciting proposals for computing time for this resource Link to external Web site, which should be operational in 2011.

Learn more about NIGMS and Blue Waters.


Tom Bishop
Center for Computational Sciences, Tulane University

E-mail: bishop@tulane.edu
http://dna.ccs.tulane.edu Link to external Web site

Area of Interest: Structure and dynamics of chromatin and nucleosomes; nucleosome positioning


David Burns
Division of AIDS/Prevention Research Branch, NIH National Institute of Allergy and Infectious Diseases

E-mail: burnsda@niaid.nih.gov

Area of Interest: Given that a fully effective HIV/AIDS vaccine is unlikely to be available for the foreseeable future, we must combine available prevention interventions in an optimal manner for each high-risk population and setting on an ongoing basis. More powerful computing is required to formulate and examine these strategies in a comprehensive manner, similar to MIDAS' successful influenza project


Jianlin Cheng
Department of Computer Science, University of Missouri, Columbia

E-mail: chengji@missouri.edu
http://www.cs.missouri.edu/~chengji Link to external Web site

Area of Interest: Develop computational methods for the prediction of protein structure at 1D, 2D, 3D and 4D levels, including protein secondary structure, solvent accessibility, mutation stability, domain boundaries, disordered regions, disulfide bonds, beta-sheet topology, intra-chain residue contacts, tertiary structure, inter-chain residue contacts, protein model quality and protein folding rate


Xu Huang
School of Computer Science and Technology, Soochow University (China)

E-mail: 20084027065004@suda.edu.cn

Area of Interest: de novo protein structure prediction, protein-protein docking


This page last reviewed on August 19, 2011